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Partial differential equations (PDEs) have become an essential tool for modeling complex physical systems. Such equations are typically solved numerically via mesh-based methods, such as finite element methods, with solutions over the spatial domain. However, obtaining these solutions are often prohibitively costly, limiting the feasibility of exploring parameters in PDEs. In this article, we propose an efficient emulator that simultaneously predicts the solutions over the spatial domain, with theoretical justification of its uncertainty quantification. The novelty of the proposed method lies in the incorporation of the mesh node coordinates into the statistical model. In particular, the proposed method segments the mesh nodes into multiple clusters via a Dirichlet process prior and fits Gaussian process models with the same hyperparameters in each of them. Most importantly, by revealing the underlying clustering structures, the proposed method can provide valuable insights into qualitative features of the resulting dynamics that can be used to guide further investigations. Real examples are demonstrated to show that our proposed method has smaller prediction errors than its main competitors, with competitive computation time, and identifies interesting clusters of mesh nodes that possess physical significance, such as satisfying boundary conditions. An R package for the proposed methodology is provided in an open repository.more » « less
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Denolle, Marine A; Tape, Carl; Bozdağ, Ebru; Wang, Yinzhi; Waldhauser, Felix; Gabriel, Alice-Agnes; Braunmiller, Jochen; Chow, Bryant; Ding, Liang; Feng, Kuan-Fu; et al (, Seismological Research Letters)Abstract With the rise of data volume and computing power, seismological research requires more advanced skills in data processing, numerical methods, and parallel computing. We present the experience of conducting training workshops in various forms of delivery to support the adoption of large-scale high-performance computing (HPC) and cloud computing, advancing seismological research. The seismological foci were on earthquake source parameter estimation in catalogs, forward and adjoint wavefield simulations in 2D and 3D at local, regional, and global scales, earthquake dynamics, ambient noise seismology, and machine learning. This contribution describes the series of workshops delivered as part of research projects, the learning outcomes for participants, and lessons learned by the instructors. Our curriculum was grounded on open and reproducible science, large-scale scientific computing and data mining, and computing infrastructure (access and usage) for HPC and the cloud. We also describe the types of teaching materials that have proven beneficial to the instruction and the sustainability of the program. We propose guidelines to deliver future workshops on these topics.more » « lessFree, publicly-accessible full text available June 5, 2026
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He, Yun-Yun; Srisombut, Kwansupa; Xing, Ding-Liang; Swenson, Nanthan G.; Asefa, Mengesha; Cao, Min; Song, Xiao-Yang; Wen, Han-Dong; Yang, Jie (, Plant Diversity)
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